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Load a module file and work interactively as usual. When ready, free the ressources:
$ scancel <jobID>
R packages
List of installed R packages
The following packages are added, when a new version of R is installed. Please contact support to extend this list.
Note, this list is generated automatically and will become available with a delay of about 3 hours.
Building R-packages with rstudio or Rscript
R-packages must be build with the same compiler as R itself was build, see the table above. This happens, when Rscript is used and the appropriate compiler module is loaded.
Hence, for installing packages in /sw it is required, to use Rscript like
$ Rscript -e 'install.packages("'$package'",repos="'$REPOSITORY'",INSTALL_opts="--html")'Using INSTALL_opts="--html" keeps documentation of installed packages up to date! For convinience, scripts are available in the installation directory:
- install_packages, install_package, remove_package, sync_phywiki
For convenience, R - installers may use the script install_package available in the R installation directory. Here the workarounds are collected needed to install stiff packages.
Other users may request package installation via support or install in their HOME - directory.
Documentation
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